Author Klumpp, Stefan

• 2016 | Journal Article
  ​ ​Asymmetric exclusion process with a dynamic roadblock and open boundaries​
  Sahoo, M. & Klumpp, S.​ (2016) 
  Journal of Physics A Mathematical and Theoretical, 49(31) art. 315001​.​ DOI: https://doi.org/10.1088/1751-8113/49/31/315001 
  ​Details  DOI  WoS 

• 2016 | Review | 
  ​ ​Magnetotactic bacteria Magnetic navigation on the microscale​
  Klumpp, S.& Faivre, D.​ (2016)
  The European Physical Journal Special Topics, 225​(11-12) pp. 2173​-2188​.​
  Heidelberg​: Springer. DOI: https://doi.org/10.1140/epjst/e2016-60055-y 
  ​Details  DOI  WoS 

• 2016 | Journal Article
  ​ ​Facilitated diffusion in the presence of obstacles on the DNA​
  Gomez, D. & Klumpp, S.​ (2016) 
  Physical Chemistry Chemical Physics, 18(16) pp. 11184​-11192​.​ DOI: https://doi.org/10.1039/c6cp00307a 
  ​Details  DOI  PMID  PMC  WoS 

• 2016 | Journal Article | 
  ​ ​Segregation of prokaryotic magnetosomes organelles is driven by treadmilling of a dynamic actin-like MamK filament​
  Toro-Nahuelpan, M.; Mueller, F. D.; Klumpp, S.; Plitzko, J. M.; Bramkamp, M. & Schueler, D.​ (2016) 
  BMC Biology, 14 art. 88​.​ DOI: https://doi.org/10.1186/s12915-016-0290-1 
  ​Details  DOI  PMID  PMC  WoS 

• 2017 | Journal Article | 
  ​ ​Modeling sRNA-Regulated Plasmid Maintenance​
  Gong, C. C. & Klumpp, S.​ (2017) 
  PLoS ONE, 12(1) art. e0169703​.​ DOI: https://doi.org/10.1371/journal.pone.0169703 
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• 2017 | Journal Article
  ​ ​Large-scale reduction of the Bacillus subtilis genome: consequences for the transcriptional network, resource allocation, and metabolism​
  Reuss, D. R.; Altenbuchner, J.; Maeder, U.; Rath, H.; Ischebeck, T.; Sappa, P. K. & Thuermer, A. et al.​ (2017) 
  Genome Research, 27(2) pp. 289​-299​.​ DOI: https://doi.org/10.1101/gr.215293.116 
  ​Details  DOI  PMID  PMC  WoS 

• 2020 | Journal Article
  ​ ​Selection for Function: From Chemically Synthesized Prototypes to 3D‐Printed Microdevices​
  Bachmann, F.; Giltinan, J.; Codutti, A.; Klumpp, S.; Sitti, M. & Faivre, D.​ (2020) 
  Advanced Intelligent Systems, 2(10) art. 2000078​.​ DOI: https://doi.org/10.1002/aisy.202000078 
  ​Details  DOI 

• 2021 | Journal Article
  ​ ​Opportunities and utilization of branching and step-out behavior in magnetic microswimmers with a nonlinear response​
  Bachmann, F.; Giltinan, J.; Codutti, A.; Klumpp, S.; Sitti, M. & Faivre, D.​ (2021) 
  Applied Physics Letters, 118(17) pp. 174102​.​ DOI: https://doi.org/10.1063/5.0045454 
  ​Details  DOI 

• 2021 | Journal Article
  ​ ​Quasi-essentiality of RNase Y in Bacillus subtilis is caused by its critical role in the control of mRNA homeostasis​
  Benda, M.; Woelfel, S.; Faßhauer, P.; Gunka, K.; Klumpp, S.; Poehlein, A. & Kálalová, D. et al.​ (2021) 
  Nucleic Acids Research, 49(12) pp. 7088​-7102​.​ DOI: https://doi.org/10.1093/nar/gkab528 
  ​Details  DOI 

• 2021 | Journal Article
  ​ ​Enhanced diffusion of a tracer particle in a lattice model of a crowded active system​
  Abbaspour, L. & Klumpp, S.​ (2021) 
  Physical Review E, 103(5).​ DOI: https://doi.org/10.1103/PhysRevE.103.052601 
  ​Details  DOI 

• 2021 | Journal Article | 
  ​ ​Stokesian dynamics simulations of a magnetotactic bacterium​
  Mohammadinejad, S.; Faivre, D. & Klumpp, S.​ (2021) 
  The European Physical Journal. E, Soft Matter, 44(3).​ DOI: https://doi.org/10.1140/epje/s10189-021-00038-5 
  ​Details  DOI 

• 2021 | Journal Article | 
  ​ ​Orientation fluctuations in magnetotactic swimming​
  Smyk, S.; Telezki, V.; Riepl, J.; Hayes, J. & Klumpp, S.​ (2021) 
  European Physical Journal Special Topics, 230(4) pp. 1099​-1103​.​ DOI: https://doi.org/10.1140/epjs/s11734-021-00078-0 
  ​Details  DOI 

• 2021 | Journal Article | Research Paper | 
  ​ ​Vimentin intermediate filaments stabilize dynamic microtubules by direct interactions​
  Schaedel, L.; Lorenz, C.; Schepers, A. V.; Klumpp, S. & Köster, S.​ (2021) 
  Nature Communications, 12(1) art. 3799​.​ DOI: https://doi.org/10.1038/s41467-021-23523-z 
  ​Details  DOI 

• 2021 | Journal Article | Research Paper
  ​ ​Reflections on COVID-19–Induced Online Teaching in Biophysics Courses​
  Klumpp, S.; Köster, S. ; Pawsey, A. C.; Lips, Y.; Wenderoth, M. & Klein, P.​ (2021) 
  The Biophysicist, 2(2) pp. 20​-22​.​ DOI: https://doi.org/10.35459/tbp.2021.000183 
  ​Details  DOI 

• 2022 | Journal Article | Research Paper | 
  ​ ​Synchronization of a genetic oscillator with the cell division cycle​
  Knotz, G.; Parlitz, U. & Klumpp, S.​ (2022) 
  New Journal of Physics, 24(3).​ DOI: https://doi.org/10.1088/1367-2630/ac5c16 
  ​Details  DOI 

• 2023 | Journal Article
  ​ ​Transcription-translation coupling: Traveling a road under construction​
  Klumpp, S.​ (2023) 
  Biophysical Journal, 122(1) pp. 1​-3​.​ DOI: https://doi.org/10.1016/j.bpj.2022.12.006 
  ​Details  DOI 

• 2023 | Journal Article
  ​ ​Theoretical efficiency limits and speed-efficiency trade-off in myosin motors​
  Vilfan, A. & Šarlah, A.​ (2023) 
  PLOS Computational Biology, 19(7) art. e1011310​.​ DOI: https://doi.org/10.1371/journal.pcbi.1011310 
  ​Details  DOI 

• 2023 | Journal Article
  ​ ​Effects of direction reversals on patterns of active filaments​
  Abbaspour, L.; Malek, A.; Karpitschka, S. & Klumpp, S.​ (2023) 
  Physical Review Research, 5(1).​ DOI: https://doi.org/10.1103/PhysRevResearch.5.013171 
  ​Details  DOI 

• 2023 | Journal Article
  ​ ​The motility-matrix production switch in Bacillus subtilis —a modeling perspective​
  Dannenberg, S.; Penning, J.; Simm, A. & Klumpp, S.​ (2023) 
  Journal of Bacteriology, art. e00047-23​.​ DOI: https://doi.org/10.1128/jb.00047-23 
  ​Details  DOI 

• 2023 | Journal Article | Research Paper
  ​ ​Keratin filament mechanics and energy dissipation are determined by metal-like plasticity​
  Lorenz, C.; Forsting, J.; Style, R. W.; Klumpp, S. & Köster, S. ​ (2023) 
  Matter,.​ DOI: https://doi.org/10.1016/j.matt.2023.04.014 
  ​Details  DOI 

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